PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G421600.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 249aa    MW: 28652.5 Da    PI: 6.7785
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G421600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.73.6e-1279129355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                         +h e+E++RR+++   +  Lr+l+P+      ++K s ++   +A++YI++ q
  Aqcoe5G421600.1.p  79 IMHREVEKQRRQEMAGLYRSLRSLVPHeY---LKGKRSTSDHMNEATNYIRHQQ 129
                        58*************************77...9*******************88 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.8E-1375144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.6276128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.7E-980146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.5E-980129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.63E-881133No hitNo description
SMARTSM003534.4E-482134IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MNDYDMNHLN PLKQMNELLY QIPLISFQQE MDPPSCDFDP FIKLDKIQQK GNRKSFESSN  60
KIDEGGCNNN NNNNKKIKIM HREVEKQRRQ EMAGLYRSLR SLVPHEYLKG KRSTSDHMNE  120
ATNYIRHQQI KIKELVKKRD ELKRISNSST CDTEKQSCCS QNFVTVQPRL AGVEVIVDCD  180
LKNRGLALSE ILGVLAEEEL EVICCATTKV NEHSFYSIQA EVLNPDSVDL SSLQHKLIDL  240
NHLYENHS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011041656.18e-53PREDICTED: transcription factor bHLH118-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.14e-36bHLH family protein